5AFF
Symportin 1 chaperones 5S RNP assembly during ribosome biogenesis by occupying an essential rRNA binding site
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-2 |
Synchrotron site | ESRF |
Beamline | ID23-2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-10-30 |
Detector | MARRESEARCH |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 60.087, 105.959, 147.234 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.256 - 3.398 |
R-factor | 0.2391 |
Rwork | 0.236 |
R-free | 0.29980 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | PDB ENTRIES 4GMO AND 3U5E CHAIN J |
RMSD bond length | 0.007 |
RMSD bond angle | 1.332 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | PHENIX |
Refinement software | PHENIX ((PHENIX.REFINE)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.290 | 3.580 |
High resolution limit [Å] | 3.400 | 3.400 |
Rmerge | 0.080 | 0.580 |
Number of reflections | 13505 | |
<I/σ(I)> | 15.8 | 3.19 |
Completeness [%] | 99.8 | 98.9 |
Redundancy | 8.1 | 8.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | 0.1 M SODIUM ACETATE, 8% (V/V) PEG 4000 |