Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5AFA

Crystal structure of Laccase from Thermus thermophilus HB27 complexed with Ag, crystal of the holoenzyme soaked for 30 m in 5 mM AgNO3 at 278 K.

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS BEAMLINE X6A
Synchrotron siteNSLS
BeamlineX6A
Temperature [K]100
Detector technologyCCD
Collection date2013-07-16
DetectorADSC QUANTUM 270
Spacegroup nameC 2 2 21
Unit cell lengths93.706, 110.579, 96.547
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution29.346 - 2.193
R-factor0.1484
Rwork0.146
R-free0.19430
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2xu9
RMSD bond length0.009
RMSD bond angle1.333
Data reduction softwareXDS
Data scaling softwareSCALA
Phasing softwarePHENIX
Refinement softwarePHENIX ((PHENIX.REFINE))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]29.3502.310
High resolution limit [Å]2.1902.190
Rmerge0.1700.290
Number of reflections25637
<I/σ(I)>5.13.6
Completeness [%]98.288.5
Redundancy4.13.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
180.1 M HEPES PH 7.5, 70 % MPD BEFORE DATA COLLECTION THE CRYSTAL WAS SOAKED FOR 30 MINUTES IN 5 MM AGNO3

225946

PDB entries from 2024-10-09

PDB statisticsPDBj update infoContact PDBjnumon