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5ACR

W228Y-Investigation of the impact from residues W228 and Y233 in the metallo-beta-lactamase GIM-1

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE BM30A
Synchrotron siteESRF
BeamlineBM30A
Temperature [K]100
Detector technologyCCD
DetectorADSC QUANTUM 315r
Spacegroup nameP 1 21 1
Unit cell lengths38.532, 129.732, 40.396
Unit cell angles90.00, 96.50, 90.00
Refinement procedure
Resolution24.747 - 1.900
R-factor0.2039
Rwork0.202
R-free0.24420
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2ynt
RMSD bond length0.008
RMSD bond angle1.271
Data reduction softwareXDS
Phasing softwarePHASER
Refinement softwarePHENIX ((PHENIX.REFINE))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]45.0002.000
High resolution limit [Å]1.8101.900
Rmerge0.0700.460
Number of reflections30606
<I/σ(I)>6.52.3
Completeness [%]99.197.5
Redundancy3.52.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
124% PEG 5000 MONOMETHYL ETHER (PEG 5K MME), 0.1 M SODIUM ACETATE, PH 5.5 AND 0.12 POTASSIUM THIOCYANATE.

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PDB entries from 2024-10-30

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