5A80
Crystal structure of human JMJD2A in complex with compound 40
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I02 |
Synchrotron site | Diamond |
Beamline | I02 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-02-19 |
Detector | DECTRIS PILATUS 6M |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 101.810, 149.190, 57.240 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 53.440 - 2.280 |
R-factor | 0.1927 |
Rwork | 0.190 |
R-free | 0.24890 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2oq7 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | PHENIX |
Refinement software | PHENIX ((PHENIX.REFINE)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 53.440 | 2.340 |
High resolution limit [Å] | 2.280 | 2.280 |
Rmerge | 0.090 | 0.680 |
Number of reflections | 40478 | |
<I/σ(I)> | 10.1 | 2.2 |
Completeness [%] | 99.6 | 100 |
Redundancy | 5.9 | 6.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | 8.5 | 30% PEG3350, 0.1M TRIS PH 8.5, 0.2M AMMONIUM SULFATE |