5A7W
Crystal structure of human JMJD2A in complex with compound 35
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I02 |
Synchrotron site | Diamond |
Beamline | I02 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-02-19 |
Detector | DECTRIS PILATUS 6M |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 101.240, 149.750, 57.340 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.893 - 2.270 |
R-factor | 0.227 |
Rwork | 0.225 |
R-free | 0.27280 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4ura |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | PHENIX |
Refinement software | PHENIX ((PHENIX.REFINE)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.920 | 2.330 |
High resolution limit [Å] | 2.270 | 2.270 |
Rmerge | 0.100 | 0.890 |
Number of reflections | 40875 | |
<I/σ(I)> | 9.5 | 1.9 |
Completeness [%] | 99.4 | 99.6 |
Redundancy | 4.7 | 4.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | 6 | 30% PEG3350 -- 0.1M BIS-TRIS PH 6.0 -- 0.25M AMMONIUM SULFATE |