5A0P
Apo-structure of metalloprotease Zmp1 from Clostridium difficile
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-06-05 |
Detector | DECTRIS PILATUS 6M |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 43.169, 71.769, 117.798 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.530 - 1.398 |
R-factor | 0.1573 |
Rwork | 0.156 |
R-free | 0.18170 |
Structure solution method | SAD |
Starting model (for MR) | NONE |
RMSD bond length | 0.006 |
RMSD bond angle | 1.022 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHENIX |
Refinement software | PHENIX ((PHENIX.REFINE)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.500 | 1.490 |
High resolution limit [Å] | 1.400 | 1.400 |
Rmerge | 0.050 | 0.520 |
Number of reflections | 71874 | |
<I/σ(I)> | 15.66 | 2.48 |
Completeness [%] | 98.2 | 95.6 |
Redundancy | 4.3 | 4.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | 8 | 293 | 2.1 M AMMONIUM PHOSPHATE, 0.1 M TRIS PH 8.0 AT 293 K |