5ZS7
Acetylation of lysine 100 in Phosphoglycerate mutase 1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2017-09-06 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.97853 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 78.833, 82.827, 100.232 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 36.682 - 2.680 |
R-factor | 0.1925 |
Rwork | 0.189 |
R-free | 0.25510 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4pgz |
RMSD bond length | 0.008 |
RMSD bond angle | 1.183 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.8.2_1309) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.780 |
High resolution limit [Å] | 2.680 | 5.770 | 2.680 |
Rmerge | 0.153 | 0.068 | 0.807 |
Rmeas | 0.167 | 0.074 | 0.902 |
Rpim | 0.067 | 0.030 | 0.393 |
Number of reflections | 19062 | 2057 | 1844 |
<I/σ(I)> | 4.2 | ||
Completeness [%] | 99.5 | 99.7 | 98 |
Redundancy | 6 | 6.1 | 4.7 |
CC(1/2) | 0.994 | 0.684 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 289 | MES, pH 6.0, PEG 3350 |