5ZM5
Crystal structure of human ORP1-ORD in complex with cholesterol at 2.6 A resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U1 |
Synchrotron site | SSRF |
Beamline | BL17U1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-12-25 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.97961 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 135.803, 135.803, 91.154 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 39.954 - 2.600 |
R-factor | 0.1793 |
Rwork | 0.178 |
R-free | 0.20050 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4ic4 |
RMSD bond length | 0.012 |
RMSD bond angle | 1.085 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX ((1.11.1_2575: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.640 |
High resolution limit [Å] | 2.600 | 2.600 |
Rmerge | 0.124 | 0.617 |
Rmeas | 0.130 | 0.644 |
Rpim | 0.038 | 0.183 |
Number of reflections | 30261 | 1478 |
<I/σ(I)> | 24.18 | 4.86 |
Completeness [%] | 100.0 | 100 |
Redundancy | 12.1 | 12.3 |
CC(1/2) | 0.927 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.2 | 293 | 100mM Sodium Cacodylate, pH 6.2, 1.2M Sodium Citrate |