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5ZCM

Crystal structure of Xylose reductase from Debaryomyces nepalensis in complex with NADP-DTT adduct

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsBRUKER AXS MICROSTAR
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2017-01-18
DetectorMAR scanner 345 mm plate
Wavelength(s)1.5418
Spacegroup nameC 2 2 21
Unit cell lengths99.590, 108.220, 71.820
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution36.641 - 1.700
R-factor0.1636
Rwork0.162
R-free0.18510
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5zci
RMSD bond length0.010
RMSD bond angle1.112
Data reduction softwareXDS
Data scaling softwareAimless (0.5.4)
Phasing softwarePHASER
Refinement softwarePHENIX (1.11.1_2575)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]36.64136.6401.730
High resolution limit [Å]1.7009.0001.700
Rmerge0.1520.0580.802
Rmeas0.1580.0610.834
Rpim0.0430.0170.226
Number of reflections427183362192
<I/σ(I)>13
Completeness [%]99.498.798.3
Redundancy13.312.213.1
CC(1/2)0.9970.9980.706
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.529335% PEG 3000, 1 M HEPES (pH 7.5), 1.5 M ammonium sulfate

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