5ZCM
Crystal structure of Xylose reductase from Debaryomyces nepalensis in complex with NADP-DTT adduct
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | ROTATING ANODE |
| Source details | BRUKER AXS MICROSTAR |
| Temperature [K] | 100 |
| Detector technology | IMAGE PLATE |
| Collection date | 2017-01-18 |
| Detector | MAR scanner 345 mm plate |
| Wavelength(s) | 1.5418 |
| Spacegroup name | C 2 2 21 |
| Unit cell lengths | 99.590, 108.220, 71.820 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 36.641 - 1.700 |
| R-factor | 0.1636 |
| Rwork | 0.162 |
| R-free | 0.18510 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 5zci |
| RMSD bond length | 0.010 |
| RMSD bond angle | 1.112 |
| Data reduction software | XDS |
| Data scaling software | Aimless (0.5.4) |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.11.1_2575) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 36.641 | 36.640 | 1.730 |
| High resolution limit [Å] | 1.700 | 9.000 | 1.700 |
| Rmerge | 0.152 | 0.058 | 0.802 |
| Rmeas | 0.158 | 0.061 | 0.834 |
| Rpim | 0.043 | 0.017 | 0.226 |
| Number of reflections | 42718 | 336 | 2192 |
| <I/σ(I)> | 13 | ||
| Completeness [%] | 99.4 | 98.7 | 98.3 |
| Redundancy | 13.3 | 12.2 | 13.1 |
| CC(1/2) | 0.997 | 0.998 | 0.706 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 293 | 35% PEG 3000, 1 M HEPES (pH 7.5), 1.5 M ammonium sulfate |






