5ZBD
Crystal structure of tryptophan oxidase (C395A mutant) from Chromobacterium violaceum
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE AR-NW12A |
Synchrotron site | Photon Factory |
Beamline | AR-NW12A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-06-18 |
Detector | ADSC QUANTUM 270 |
Wavelength(s) | 1 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 87.860, 89.270, 112.700 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 69.980 - 1.800 |
R-factor | 0.15981 |
Rwork | 0.158 |
R-free | 0.20225 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.018 |
RMSD bond angle | 1.832 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP (11.2.05) |
Refinement software | REFMAC (5.8.0049) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 69.980 | 69.980 | 1.900 |
High resolution limit [Å] | 1.800 | 5.000 | 1.800 |
Rmerge | 0.095 | 0.087 | 0.274 |
Rmeas | 0.103 | 0.094 | 0.295 |
Total number of observations | 605654 | ||
Number of reflections | 82681 | 4107 | 12246 |
<I/σ(I)> | 14.45 | 21.21 | 6.82 |
Completeness [%] | 100.0 | 99.5 | 100 |
Redundancy | 7.325 | 6.852 | 7.341 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 293 | 0.1M MES, 40% Polyethylene glycol 400, pH6.8 |