5ZB2
Crystal structure of Rad7 and Elc1 complex in yeast
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-1A |
Synchrotron site | Photon Factory |
Beamline | BL-1A |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-05-25 |
Detector | DECTRIS EIGER X 4M |
Wavelength(s) | 1.1000 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 110.921, 67.764, 69.015 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.353 - 2.300 |
R-factor | 0.197077370165 |
Rwork | 0.195 |
R-free | 0.22407 |
Structure solution method | SAD |
RMSD bond length | 0.003 |
RMSD bond angle | 0.530 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | SHELXCD |
Refinement software | phenix.refine (1.10_2155) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.340 |
High resolution limit [Å] | 2.300 | 6.240 | 2.300 |
Rmerge | 0.110 | 0.057 | 0.682 |
Rmeas | 0.116 | 0.061 | 0.713 |
Rpim | 0.035 | 0.020 | 0.203 |
Number of reflections | 24237 | 1357 | 1186 |
<I/σ(I)> | 6.3 | ||
Completeness [%] | 97.5 | 98.7 | 96.3 |
Redundancy | 10.8 | 10.3 | 11.7 |
CC(1/2) | 0.996 | 0.898 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | EVAPORATION | 293 | 0.1 M KCl, 0.1 M sodium Citrate tribasic dihydrate, 22% PEG 3350, 0.1 M Yttrium(III) cloride hexahydrate |