5YW5
Crystal structure of Adenine phosphoribosyltransferase from Francisella tularensis in complex with adenine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS BEAMLINE X29A |
Synchrotron site | NSLS |
Beamline | X29A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-05-08 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1.075 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 55.015, 75.207, 171.999 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 44.400 - 1.900 |
R-factor | 0.1829 |
Rwork | 0.180 |
R-free | 0.23210 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5yw2 |
RMSD bond length | 0.026 |
RMSD bond angle | 2.367 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 44.400 | 44.400 | 1.930 |
High resolution limit [Å] | 1.900 | 5.160 | 1.900 |
Rmerge | 0.121 | 0.066 | 0.795 |
Rmeas | 0.130 | 0.071 | 0.852 |
Rpim | 0.045 | 0.025 | 0.302 |
Number of reflections | 56827 | 3101 | 2756 |
<I/σ(I)> | 6.9 | ||
Completeness [%] | 99.7 | 99.8 | 99 |
Redundancy | 8.4 | 7.7 | 7.8 |
CC(1/2) | 0.997 | 0.814 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 298 | 0.2M Sodium acetate, 0.1M Tris pH 8.5, 30% PEG 4000, soaked with 5mM adenine |