5YVY
Crystal structure of unlinked full length NS3 protein (eD4NS2BNS3) from DENV4 in closed conformation
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX1 |
Synchrotron site | Australian Synchrotron |
Beamline | MX1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-07-18 |
Detector | ADSC QUANTUM 210r |
Wavelength(s) | 1.0 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 52.900, 88.770, 81.450 |
Unit cell angles | 90.00, 93.85, 90.00 |
Refinement procedure
Resolution | 42.966 - 3.200 |
R-factor | 0.2081 |
Rwork | 0.205 |
R-free | 0.25700 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.003 |
RMSD bond angle | 0.606 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 81.200 | 3.460 |
High resolution limit [Å] | 3.200 | 3.200 |
Rmerge | 0.123 | 0.793 |
Rmeas | 0.169 | 1.084 |
Rpim | 0.115 | 0.735 |
Number of reflections | 10645 | 2412 |
<I/σ(I)> | 6.9 | 1.4 |
Completeness [%] | 84.8 | 93.8 |
Redundancy | 3.4 | 3.5 |
CC(1/2) | 0.984 | 0.526 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 291 | 0.1 M MES pH 6.4, 10% PEG 6000 |