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5YVL

Crystal structure of a cyclase Hpiu5 from Fischerella sp. ATCC 43239

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSRRC BEAMLINE BL15A1
Synchrotron siteNSRRC
BeamlineBL15A1
Temperature [K]100
Detector technologyCCD
Collection date2017-11-15
DetectorRAYONIX MX-300
Wavelength(s)1.0
Spacegroup nameP 21 21 21
Unit cell lengths62.390, 114.311, 132.439
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution24.993 - 2.059
R-factor0.1809
Rwork0.179
R-free0.23610
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5yvk
RMSD bond length0.014
RMSD bond angle1.497
Data reduction softwareHKL-2000
Data scaling softwareSCALEPACK
Phasing softwarePHENIX
Refinement softwarePHENIX ((1.11.1_2575: ???))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]25.00025.0002.130
High resolution limit [Å]2.0594.4302.060
Rmerge0.0460.0180.483
Rmeas0.0530.0200.566
Rpim0.0240.0090.288
Number of reflections5643362335508
<I/σ(I)>16
Completeness [%]95.099.694.1
Redundancy4.14.63.6
CC(1/2)1.0000.831
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP82950.2M sodium chloride, 20%(w/v) PEG4000

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PDB entries from 2024-05-15

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