5YVE
Crystal structure of human P2X3 receptor in complex with the AF-219 negative allosteric modulator
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL41XU |
Synchrotron site | SPring-8 |
Beamline | BL41XU |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-07-14 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1 |
Spacegroup name | H 3 2 |
Unit cell lengths | 119.613, 119.613, 235.691 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 47.587 - 3.400 |
R-factor | 0.2405 |
Rwork | 0.235 |
R-free | 0.29560 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.005 |
RMSD bond angle | 0.903 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX ((1.10_2155: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 3.600 |
High resolution limit [Å] | 3.400 | 3.400 |
Number of reflections | 17203 | |
<I/σ(I)> | 14.45 | |
Completeness [%] | 99.5 | |
Redundancy | 4.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 277 | 0.05M MgCl2, 0.1M Glycine pH 9.0, 22-24% PEG 400 |