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5YKB

The N253F mutant structure of trehalose synthase from Deinococcus radiodurans reveals an open active-site conformation

Replaces:  5GTV
Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSRRC BEAMLINE BL15A1
Synchrotron siteNSRRC
BeamlineBL15A1
Temperature [K]110
Detector technologyCCD
Collection date2014-05-10
DetectorRAYONIX MX300HE
Wavelength(s)1
Spacegroup nameP 21 21 21
Unit cell lengths100.401, 132.422, 196.013
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution30.000 - 2.760
R-factor0.1949
Rwork0.192
R-free0.25100
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4tvu
RMSD bond length0.009
RMSD bond angle1.298
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareHKL-2000
Refinement softwareREFMAC (5.8.0073)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0002.860
High resolution limit [Å]2.7602.760
Number of reflections676456642
<I/σ(I)>12.31.8
Completeness [%]99.999.3
Redundancy4.54.4
CC(1/2)0.9930.606
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP72887% PEG 4000, 0.2M sodium acetate trihydrate, 0.3M Tris-HCl (pH 7.0)

219869

PDB entries from 2024-05-15

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