5YF7
Crystals structure of Classical swine fever virus NS5B (residues 1-672)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-11-30 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9785 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 162.249, 162.249, 56.833 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 39.351 - 2.270 |
R-factor | 0.2011 |
Rwork | 0.199 |
R-free | 0.24530 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2cjq |
RMSD bond length | 0.007 |
RMSD bond angle | 0.826 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.350 |
High resolution limit [Å] | 2.270 | 4.890 | 2.270 |
Rmerge | 0.075 | 0.043 | 0.490 |
Rmeas | 0.078 | 0.045 | 0.510 |
Rpim | 0.021 | 0.013 | 0.138 |
Total number of observations | 450669 | ||
Number of reflections | 35366 | 3744 | 3416 |
<I/σ(I)> | 6.4 | ||
Completeness [%] | 99.2 | 97.7 | 98.3 |
Redundancy | 12.7 | 12.1 | 12.4 |
CC(1/2) | 0.999 | 0.968 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | EVAPORATION | 8 | 289 | Polypropylene glycol 400 |