5Y6Z
Crystal structure of the coxsackievirus A16 polymerase elongation complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U1 |
Synchrotron site | SSRF |
Beamline | BL17U1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-07-13 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9792 |
Spacegroup name | P 31 |
Unit cell lengths | 93.724, 93.724, 167.512 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 32.829 - 2.500 |
R-factor | 0.2202 |
Rwork | 0.218 |
R-free | 0.25940 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3ol6 |
RMSD bond length | 0.008 |
RMSD bond angle | 0.985 |
Data reduction software | d*TREK (9.9.9.4D) |
Data scaling software | d*TREK (9.9.9.4D) |
Phasing software | PHASER |
Refinement software | PHENIX (1.10_2155) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 46.030 | 46.030 | 2.590 |
High resolution limit [Å] | 2.500 | 5.380 | 2.500 |
Rmerge | 0.132 | 0.088 | 0.372 |
Rmeas | 0.158 | 0.107 | 0.448 |
Number of reflections | 56671 | 5623 | 5705 |
<I/σ(I)> | 4.7 | 8.6 | 2.1 |
Completeness [%] | 99.5 | 98.6 | 99.9 |
Redundancy | 2.93 | 2.88 | 2.95 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | EVAPORATION | 8.5 | 289 | ammonium dihydrogen phosphate |