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5Y1Q

Crystal structure of Plasmodium falciparum aminopeptidase N in complex with (S)-2-(3-(3-chlorobenzyl)ureido)-N-hydroxy-4-methylpentanamide

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007 HF
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2016-06-05
DetectorRIGAKU RAXIS IV++
Wavelength(s)1.54
Spacegroup nameP 21 21 21
Unit cell lengths76.128, 109.609, 113.138
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution24.810 - 2.140
R-factor0.1674
Rwork0.165
R-free0.21900
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4x2u
RMSD bond length0.017
RMSD bond angle1.787
Data reduction softwareDENZO (2.3.1)
Data scaling softwareSCALEPACK (2.2.0)
Refinement softwareREFMAC (5.8.0135)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]24.81025.0002.220
High resolution limit [Å]2.1404.6002.140
Rmerge0.0610.0550.128
Rmeas0.0660.0600.138
Rpim0.0250.0230.052
Number of reflections530695233
<I/σ(I)>27.412.4
Completeness [%]99.9100100
Redundancy76.87
CC(1/2)0.9980.9960.992
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.52980.1M Tris, pH 8.5, 0.2M Magnesium chloride, 24% PEG 2000

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