5Y12
Crystal structure of human FABP4 complexed with ligand 5-((4-methoxynaphthalene)-1-sulfonamido)pentanoic acid
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U1 |
Synchrotron site | SSRF |
Beamline | BL17U1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-01-27 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1.0000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 32.560, 53.610, 75.420 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 37.710 - 1.750 |
R-factor | 0.1727 |
Rwork | 0.170 |
R-free | 0.20030 |
RMSD bond length | 0.006 |
RMSD bond angle | 1.017 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.8_1069) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 37.710 | 37.710 | 1.800 |
High resolution limit [Å] | 1.750 | 7.830 | 1.750 |
Rmerge | 0.044 | 0.029 | 0.170 |
Rmeas | 0.052 | 0.035 | 0.203 |
Total number of observations | 95072 | ||
Number of reflections | 25482 | 239 | 1889 |
<I/σ(I)> | 20.27 | 34.46 | 7.42 |
Completeness [%] | 99.1 | 83.6 | 97.7 |
Redundancy | 3.731 | 3.402 | 3.4 |
CC(1/2) | 0.998 | 0.998 | 0.972 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 293 | 1.6M trisodium citrate, PH6.5 |