5XX1
Crystal structure of Arginine decarboxylase (AdiA) from Salmonella typhimurium
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE BM14 |
Synchrotron site | ESRF |
Beamline | BM14 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-11-17 |
Detector | MAR CCD 165 mm |
Wavelength(s) | 0.97625 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 179.360, 193.250, 280.160 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 57.120 - 3.100 |
R-factor | 0.24213 |
Rwork | 0.241 |
R-free | 0.27179 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2vyc |
RMSD bond length | 0.005 |
RMSD bond angle | 0.935 |
Data reduction software | iMOSFLM (7.1.1) |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0069) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 57.120 | 3.270 |
High resolution limit [Å] | 3.100 | 3.100 |
Rmerge | 0.260 | 0.720 |
Rpim | 0.095 | 0.267 |
Number of reflections | 160279 | 21162 |
<I/σ(I)> | 7.2 | 2.7 |
Completeness [%] | 91.2 | 83.4 |
Redundancy | 8 | 7.6 |
CC(1/2) | 0.972 | 0.799 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | MICROBATCH | 8 | 298 | 2.0M NaCl and 10% PEG8000, Tris pH 8.0 |