5XMH
Crystal structure of an IgM rheumatoid factor YES8c in complex with IgG1 Fc
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE AR-NE3A |
Synchrotron site | Photon Factory |
Beamline | AR-NE3A |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-06-15 |
Detector | DECTRIS PILATUS 2M-F |
Wavelength(s) | 1.0000 |
Spacegroup name | P 65 |
Unit cell lengths | 189.895, 189.895, 79.602 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 19.900 - 2.800 |
R-factor | 0.223 |
Rwork | 0.220 |
R-free | 0.27200 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX (1.10.1_2155) |
Refinement software | PHENIX (1.10.1_2155) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 20.000 | 2.850 |
High resolution limit [Å] | 2.800 | 2.800 |
Rmerge | 0.074 | 0.355 |
Number of reflections | 77576 | 3825 |
<I/σ(I)> | 19.1 | |
Completeness [%] | 98.7 | 95.1 |
Redundancy | 4.6 | 3.8 |
CC(1/2) | 0.917 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 293 | Tris-HCl, sodium acetate, PEG 4000 |