5XGR
Structure of the S1 subunit C-terminal domain from bat-derived coronavirus HKU5 spike protein
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SSRF BEAMLINE BL17B1 |
| Synchrotron site | SSRF |
| Beamline | BL17B1 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2016-03-18 |
| Detector | ADSC QUANTUM 315 |
| Wavelength(s) | 0.97915 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 49.612, 212.659, 87.943 |
| Unit cell angles | 90.00, 94.76, 90.00 |
Refinement procedure
| Resolution | 37.796 - 2.100 |
| R-factor | 0.2181 |
| Rwork | 0.216 |
| R-free | 0.25850 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 5gj4 |
| RMSD bond length | 0.006 |
| RMSD bond angle | 1.062 |
| Data reduction software | HKL-2000 |
| Data scaling software | HKL-2000 |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 50.000 | 2.180 |
| High resolution limit [Å] | 2.100 | 2.100 |
| Rmerge | 0.104 | |
| Rpim | 0.052 | 0.527 |
| Number of reflections | 104555 | |
| <I/σ(I)> | 15.355 | |
| Completeness [%] | 99.9 | 99.9 |
| Redundancy | 5 | 4.8 |
| CC(1/2) | 0.998 | 0.801 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 291 | 0.2M potassium thiocyanate, 20% (w/v) polyethylene glycol 3350 |
