5XB7
GH42 alpha-L-arabinopyranosidase from Bifidobacterium animalis subsp. lactis Bl-04
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-5A |
Synchrotron site | Photon Factory |
Beamline | BL-5A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-11-20 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1.0 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 177.954, 177.954, 375.697 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.368 - 2.000 |
R-factor | 0.15704 |
Rwork | 0.155 |
R-free | 0.19127 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1kwg |
RMSD bond length | 0.022 |
RMSD bond angle | 1.972 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | BALBES |
Refinement software | REFMAC (5.8.0073) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.030 |
High resolution limit [Å] | 2.000 | 2.000 |
Number of reflections | 400874 | 19842 |
<I/σ(I)> | 27.7 | 3.8 |
Completeness [%] | 100.0 | 100 |
Redundancy | 14.9 | 14.6 |
CC(1/2) | 0.989 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293.15 | 12% glycerol, 1.6 M ammonium sulfate, 0.1 M MES buffer pH 6.5 |