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5X5X

Crystal structure of the Fab fragment of anti-osteocalcin C-terminal peptide antibody KTM219

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPHOTON FACTORY BEAMLINE BL-5A
Synchrotron sitePhoton Factory
BeamlineBL-5A
Temperature [K]95
Detector technologyCCD
Collection date2014-11-08
DetectorADSC QUANTUM 315r
Wavelength(s)1.0000
Spacegroup nameP 21 2 21
Unit cell lengths64.800, 71.472, 96.882
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution50.000 - 1.900
R-factor0.1828
Rwork0.181
R-free0.22350
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4kuz
RMSD bond length0.011
RMSD bond angle1.539
Data reduction softwareDENZO
Data scaling softwareHKL-2000
Phasing softwarePHASER (2.5.5)
Refinement softwareREFMAC (5.8.0135)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0001.970
High resolution limit [Å]1.9004.0901.900
Rmeas0.0710.0330.522
Rpim0.0270.0130.194
Number of reflections3573338303462
<I/σ(I)>12.547.024.23
Completeness [%]98.899.297.5
Redundancy6.86.56.8
CC(1/2)0.9990.918
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2930.6 M sodium formate, 29% PEG 3350

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