5X5A
Human thymidylate synthase bound with phosphate ion
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX1 |
Synchrotron site | Australian Synchrotron |
Beamline | MX1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-10-04 |
Detector | ADSC QUANTUM 210r |
Wavelength(s) | 0.7749 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 109.533, 109.533, 317.467 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 20.348 - 2.390 |
R-factor | 0.2183 |
Rwork | 0.217 |
R-free | 0.25080 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1i00 |
RMSD bond length | 0.015 |
RMSD bond angle | 1.757 |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0155) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 30.000 | 30.000 | 2.490 |
High resolution limit [Å] | 2.400 | 5.160 | 2.400 |
Rmerge | 0.105 | 0.049 | 0.498 |
Rmeas | 0.110 | 0.051 | 0.522 |
Rpim | 0.032 | 0.014 | 0.149 |
Total number of observations | 672785 | ||
Number of reflections | 66303 | ||
<I/σ(I)> | 6.9 | ||
Completeness [%] | 86.1 | 98.2 | 81.6 |
Redundancy | 10.1 | 13.4 | 10.3 |
CC(1/2) | 0.999 | 0.960 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 298 | 100mM sodium calcodylate, pH 6.5, 25% PEG 4000 |