Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5X4R

Structure of the N-terminal domain (NTD) of MERS-CoV spike protein

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL17U
Synchrotron siteSSRF
BeamlineBL17U
Temperature [K]100
Detector technologyCCD
Collection date2014-06-21
DetectorADSC QUANTUM 315
Wavelength(s)1.039
Spacegroup nameP 21 21 21
Unit cell lengths51.615, 86.609, 88.098
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution44.338 - 1.500
R-factor0.1641
Rwork0.163
R-free0.19460
RMSD bond length0.004
RMSD bond angle0.958
Data reduction softwareHKL-2000
Data scaling softwareSCALEPACK
Phasing softwareSHELXD
Refinement softwarePHENIX (1.9_1692)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0001.550
High resolution limit [Å]1.5001.500
Number of reflections642286330
<I/σ(I)>27.61.6
Completeness [%]99.799.7
Redundancy8.48.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.52910.2 M Magnesium chloride hexahydrate, 0.1 M BIS-TRIS, 25% w/v Polyethylene glycol 3350

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon