Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5X1K

Vanillate/3-O-methylgallate O-demethylase, LigM, 3-O-methylgallate complex form

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPHOTON FACTORY BEAMLINE AR-NE3A
Synchrotron sitePhoton Factory
BeamlineAR-NE3A
Temperature [K]95
Detector technologyPIXEL
Collection date2015-12-19
DetectorDECTRIS PILATUS 2M-F
Wavelength(s)1.0000
Spacegroup nameP 21 21 2
Unit cell lengths104.055, 118.066, 132.823
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution44.818 - 2.150
R-factor0.2347
Rwork0.233
R-free0.27440
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5x1i
RMSD bond length0.007
RMSD bond angle0.903
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX ((1.11.1_2575: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]48.4402.190
High resolution limit [Å]2.1502.150
Number of reflections178538
<I/σ(I)>13.21.8
Completeness [%]99.797.3
Redundancy10.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2930.1M Tris pH 8.5, 0.1M LiCl, 30%(w/v) PEG8000

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon