5WZS
Crystal structure of human secreted phospholipase A2 group IIE with Compound 8
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | OXFORD DIFFRACTION ENHANCE ULTRA |
Temperature [K] | 110 |
Detector technology | CCD |
Collection date | 2014-08-07 |
Detector | OXFORD RUBY CCD |
Wavelength(s) | 1.5406 |
Spacegroup name | P 21 2 2 |
Unit cell lengths | 49.006, 60.998, 63.301 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 18.470 - 2.300 |
R-factor | 0.2174 |
Rwork | 0.215 |
R-free | 0.26550 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5wzm |
RMSD bond length | 0.009 |
RMSD bond angle | 1.360 |
Data reduction software | CrysalisPro |
Data scaling software | Aimless (0.5.28) |
Refinement software | REFMAC (5.8.0155) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 18.470 | 2.390 |
High resolution limit [Å] | 2.300 | 2.300 |
Rmerge | 0.125 | 0.595 |
Rmeas | 0.133 | 0.628 |
Rpim | 0.044 | 0.199 |
Number of reflections | 8871 | |
<I/σ(I)> | 17 | |
Completeness [%] | 99.8 | 100 |
Redundancy | 8.9 | 9.7 |
CC(1/2) | 0.997 | 0.897 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 277 | 2.2 M Sodium chloride, 0.1 M BIS-TRIS propane pH 7.0 |