Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5WTL

Crystal structure of the periplasmic portion of outer membrane protein A (OmpA) from Capnocytophaga gingivalis

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL17U
Synchrotron siteSSRF
BeamlineBL17U
Temperature [K]100
Detector technologyCCD
Collection date2012-11-28
DetectorADSC QUANTUM 315r
Wavelength(s)0.97931
Spacegroup nameP 21 21 21
Unit cell lengths73.205, 87.343, 185.458
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution42.509 - 2.298
R-factor0.2057
Rwork0.203
R-free0.25510
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4erh
RMSD bond length0.016
RMSD bond angle2.072
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Phasing softwarePHENIX
Refinement softwarePHENIX (1.8.2_1309)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]42.5092.340
High resolution limit [Å]2.2982.300
Number of reflections53087
<I/σ(I)>8.6
Completeness [%]98.6
Redundancy3.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP289100 mM MES, pH 6.0, 200 mM Ca(Ac)2, 20% PEG 8000

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon