5WTD
Structure of human serum transferrin bound ruthenium at N-lobe
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U |
Synchrotron site | SSRF |
Beamline | BL17U |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-09-23 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.99182 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 137.113, 157.351, 107.086 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 37.187 - 2.501 |
R-factor | 0.1819 |
Rwork | 0.180 |
R-free | 0.21410 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4x1b |
RMSD bond length | 0.005 |
RMSD bond angle | 0.719 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX (1.11.1_2575) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.535 |
High resolution limit [Å] | 2.501 | 6.240 | 2.501 |
Rmerge | 0.056 | 0.019 | 0.791 |
Number of reflections | 51927 | ||
<I/σ(I)> | 8.6 | ||
Completeness [%] | 99.8 | 98 | 85.76 |
Redundancy | 7.6 | 7.3 | 7.5 |
CC(1/2) | 0.999 | 0.828 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 6.6 | 298 | PIPES-Na 100 mM, disodium malonate 8 mM, PEG3350 17%, glycerol 18% |