Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5WDO

H-Ras bound to GMP-PNP at 277K

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 8.3.1
Synchrotron siteALS
Beamline8.3.1
Temperature [K]277
Detector technologyPIXEL
Collection date2017-03-24
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.88557
Spacegroup nameH 3 2
Unit cell lengths89.959, 89.959, 136.766
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution45.589 - 1.650
R-factor0.1429
Rwork0.142
R-free0.16840
Structure solution methodFOURIER SYNTHESIS
Starting model (for MR)3k8y
RMSD bond length0.010
RMSD bond angle1.129
Data reduction softwareXDS (Nov 1, 2016)
Data scaling softwareAimless (0.5.32)
Phasing softwarePHENIX (1.11.1_2575)
Refinement softwarePHENIX ((1.11.1_2575: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]45.5901.680
High resolution limit [Å]1.6501.650
Rmerge0.1753.183
Rpim0.0400.756
Number of reflections258731255
<I/σ(I)>12.61.2
Completeness [%]100.0100
Redundancy19.818.6
CC(1/2)0.9990.514
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP29316% PEG3350, 100 mM calcium acetate, pH 7.5

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon