5WCM
Crystal structure of the complex between class B3 beta-lactamase BJP-1 and 4-nitrobenzene-sulfonamide - new refinement
Replaces: 3M8TExperimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID14-1 |
Synchrotron site | ESRF |
Beamline | ID14-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2008-04-19 |
Detector | ADSC QUANTUM 210 |
Wavelength(s) | 0.9340 |
Spacegroup name | P 1 |
Unit cell lengths | 42.352, 44.908, 76.635 |
Unit cell angles | 79.34, 90.59, 61.68 |
Refinement procedure
Resolution | 50.000 - 1.200 |
R-factor | 0.1334 |
Rwork | 0.132 |
R-free | 0.15980 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3lvz |
RMSD bond length | 0.009 |
RMSD bond angle | 1.436 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.220 |
High resolution limit [Å] | 1.200 | 3.260 | 1.200 |
Rmerge | 0.044 | 0.035 | 0.292 |
Rmeas | 0.049 | 0.040 | 0.341 |
Rpim | 0.022 | 0.019 | 0.175 |
Number of reflections | 124424 | 2429 | |
<I/σ(I)> | 14.3 | 4.4 | |
Completeness [%] | 82.1 | 92.4 | 32 |
Redundancy | 4.5 | 4.9 | 3.6 |
CC(1/2) | 0.992 | 0.934 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 30-35% PEG 4000, 5MM ZNCL2, 0.5M SODIUM ACETATE, TRIS-HCL 0.1M, PH 8.5 |