5WCH
Crystal structure of the catalytic domain of human USP9X
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-06-19 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.97929 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 79.372, 79.048, 131.933 |
Unit cell angles | 90.00, 103.76, 90.00 |
Refinement procedure
Resolution | 50.010 - 2.500 |
R-factor | 0.2084 |
Rwork | 0.207 |
R-free | 0.26070 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 1.226 |
Data reduction software | HKL-3000 |
Data scaling software | SCALEPACK |
Phasing software | BALBES |
Refinement software | REFMAC (5.8.0124) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.540 |
High resolution limit [Å] | 2.500 | 6.780 | 2.500 |
Rmerge | 0.125 | 0.064 | 0.863 |
Rmeas | 0.140 | 0.071 | 0.983 |
Rpim | 0.063 | 0.031 | 0.463 |
Total number of observations | 239510 | ||
Number of reflections | 52761 | 2623 | |
<I/σ(I)> | 6.4 | ||
Completeness [%] | 96.4 | 98.8 | 95.6 |
Redundancy | 4.5 | 4.8 | 4.2 |
CC(1/2) | 0.996 | 0.639 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 298 | 20% PEG 3350, 0.2 M Diammonium tartrate |