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5WA4

Pyridine synthase, TbtD, from thiomuracin biosynthesis bound to an N-terminal leader peptide fragment

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-D
Synchrotron siteAPS
Beamline21-ID-D
Temperature [K]100
Detector technologyPIXEL
Collection date2016-06-04
DetectorDECTRIS EIGER X 9M
Wavelength(s)1.07809
Spacegroup nameP 21 21 21
Unit cell lengths105.383, 105.998, 234.120
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution48.048 - 2.646
R-factor0.2232
Rwork0.220
R-free0.28730
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5w98
RMSD bond length0.010
RMSD bond angle1.430
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHASER
Refinement softwarePHENIX (1.9_1692)
Data quality characteristics
 Overall
Low resolution limit [Å]23.127
High resolution limit [Å]2.646
Number of reflections76366
<I/σ(I)>15.9
Completeness [%]98.9
Redundancy13.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.52890.2 M magnesium formate and 17.5% PEG 3350

219869

PDB entries from 2024-05-15

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