5WA4
Pyridine synthase, TbtD, from thiomuracin biosynthesis bound to an N-terminal leader peptide fragment
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-D |
Synchrotron site | APS |
Beamline | 21-ID-D |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-06-04 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 1.07809 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 105.383, 105.998, 234.120 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.048 - 2.646 |
R-factor | 0.2232 |
Rwork | 0.220 |
R-free | 0.28730 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5w98 |
RMSD bond length | 0.010 |
RMSD bond angle | 1.430 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | |
Low resolution limit [Å] | 23.127 |
High resolution limit [Å] | 2.646 |
Number of reflections | 76366 |
<I/σ(I)> | 15.9 |
Completeness [%] | 98.9 |
Redundancy | 13.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 289 | 0.2 M magnesium formate and 17.5% PEG 3350 |