5W8Q
Crystal structure of biphenyl synthase from Malus domestica
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ALS BEAMLINE 8.2.1 |
| Synchrotron site | ALS |
| Beamline | 8.2.1 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2010-02-12 |
| Detector | ADSC QUANTUM 315 |
| Wavelength(s) | 0.99980 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 55.270, 113.020, 62.770 |
| Unit cell angles | 90.00, 93.15, 90.00 |
Refinement procedure
| Resolution | 27.917 - 1.173 |
| R-factor | 0.0992 |
| Rwork | 0.098 |
| R-free | 0.12160 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 1bi5 |
| RMSD bond length | 0.012 |
| RMSD bond angle | 1.421 |
| Data reduction software | MOSFLM |
| Data scaling software | SCALA (3.3.16) |
| Phasing software | PHASER |
| Refinement software | PHENIX ((phenix.refine: 1.9_1692)) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 62.675 | 27.917 | 1.240 |
| High resolution limit [Å] | 1.173 | 3.710 | 1.173 |
| Rmerge | 0.084 | 0.057 | 0.297 |
| Rmeas | 0.094 | 0.062 | 0.378 |
| Rpim | 0.041 | 0.026 | 0.231 |
| Number of reflections | 251517 | ||
| <I/σ(I)> | 11.3 | 10.6 | 1.4 |
| Completeness [%] | 98.3 | 98 | 94.2 |
| Redundancy | 4.5 | 5.5 | 2.5 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 278 | 14% PEG 8000, 0.3M Ammonium acetate, 0.1M sodium-HEPES pH7.5 |






