5W7N
2-Se-T2/4-DNA and native RNA hybrid in complex with RNase H catalytic domain D132N mutant
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.1 |
Synchrotron site | ALS |
Beamline | 5.0.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-05-14 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 80.686, 37.690, 62.180 |
Unit cell angles | 90.00, 95.95, 90.00 |
Refinement procedure
Resolution | 50.000 - 1.800 |
R-factor | 0.19433 |
Rwork | 0.192 |
R-free | 0.23201 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2g8u |
RMSD bond length | 0.020 |
RMSD bond angle | 2.238 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 61.850 | 1.860 |
High resolution limit [Å] | 1.800 | 1.800 |
Rpim | 0.027 | 0.085 |
Number of reflections | 17561 | 913 |
<I/σ(I)> | 21.8 | 5.3 |
Completeness [%] | 88.9 | 52.7 |
Redundancy | 4.3 | |
CC(1/2) | 0.974 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 293 | 0.1M MES pH 6.5, 12%(w/v) PEG 20000 |