5W50
Crystal structure of the segment, LIIKGI, from the RRM2 of TDP-43, residues 248-253
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-03-06 |
Detector | ADSC HF-4M |
Wavelength(s) | 0.9792 |
Spacegroup name | P 1 |
Unit cell lengths | 11.543, 9.592, 21.175 |
Unit cell angles | 95.63, 98.21, 76.50 |
Refinement procedure
Resolution | 20.910 - 1.400 |
R-factor | 0.1714 |
Rwork | 0.168 |
R-free | 0.20750 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2omq |
RMSD bond length | 0.011 |
RMSD bond angle | 1.643 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 100.000 | 100.000 | 1.450 |
High resolution limit [Å] | 1.400 | 3.020 | 1.400 |
Rmerge | 0.127 | 0.089 | 0.361 |
Number of reflections | 1561 | ||
<I/σ(I)> | 5.9 | ||
Completeness [%] | 94.5 | 94.5 | 94.6 |
Redundancy | 4.6 | 4.1 | 4.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 9.5 | 298 | 100 mM CHES, pH 9.5, 20% PEG8000, 10 mM lithium hydroxide |