5W0D
Inferred precursor (UCA) of the human antibody lineage K03.12 in complex with influenza hemagglutinin H1 Solomon Islands/03/2006
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-03-26 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.97920 |
Spacegroup name | P 1 |
Unit cell lengths | 40.620, 61.660, 83.860 |
Unit cell angles | 106.57, 95.25, 106.70 |
Refinement procedure
Resolution | 39.850 - 1.899 |
R-factor | 0.198 |
Rwork | 0.196 |
R-free | 0.23400 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | PDB entries 5W0D & 5UGY |
RMSD bond length | 0.008 |
RMSD bond angle | 1.033 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX ((1.12_2829: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.967 |
High resolution limit [Å] | 1.899 | 1.899 |
Rmerge | 0.112 | 1.395 |
Number of reflections | 54618 | 5534 |
<I/σ(I)> | 8.22 | 1.13 |
Completeness [%] | 94.2 | 93.86 |
Redundancy | 4.4 | 4.3 |
CC(1/2) | 0.996 | 0.536 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 291.15 | 200 mM sodium chloride, 100 mM PIPES, pH 6.0, 20% w/v PEG2000 MME |