5VYQ
Crystal structure of the N-formyltransferase Rv3404c from mycobacterium tuberculosis in complex with YDP-Qui4N and folinic acid
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | ROTATING ANODE |
| Source details | RIGAKU RU200 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2017-01-20 |
| Detector | Bruker Platinum 135 |
| Wavelength(s) | 1.5418 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 47.486, 73.018, 173.265 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 50.000 - 1.600 |
| R-factor | 0.16841 |
| Rwork | 0.167 |
| R-free | 0.20025 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 4pzu |
| RMSD bond length | 0.011 |
| RMSD bond angle | 1.913 |
| Data reduction software | SAINT |
| Data scaling software | SADABS |
| Phasing software | PHASER |
| Refinement software | REFMAC (5.8.0124) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 50.000 | 1.700 |
| High resolution limit [Å] | 1.600 | 1.600 |
| Rmerge | 0.078 | 0.351 |
| Number of reflections | 79772 | 12792 |
| <I/σ(I)> | 12.4 | 2.5 |
| Completeness [%] | 99.1 | 96.8 |
| Redundancy | 6.4 | 3.2 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 8 | 293 | 20% PEG-8000, 100 mM HEPPS, 200 mM KCl, 5 mM TDP-Qui4N, 5 mM folinic acid |
