5VTV
Crystal structure of the A/Hong Kong/1/1968 (H3N2) influenza virus hemagglutinin G225M/L226T/S228A mutant in complex with 3'-SLN
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-D |
Synchrotron site | APS |
Beamline | 23-ID-D |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-10-15 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.0331 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 208.646, 131.353, 72.780 |
Unit cell angles | 90.00, 97.76, 90.00 |
Refinement procedure
Resolution | 50.000 - 2.250 |
R-factor | 0.18478 |
Rwork | 0.183 |
R-free | 0.21209 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4fnk |
RMSD bond length | 0.010 |
RMSD bond angle | 1.481 |
Data scaling software | HKL-2000 (712) |
Phasing software | PHASER (2.5.6) |
Refinement software | REFMAC (5.8.0155) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.320 |
High resolution limit [Å] | 2.250 | 2.250 |
Rpim | 0.050 | 0.380 |
Number of reflections | 92558 | 8215 |
<I/σ(I)> | 22 | 1.4 |
Completeness [%] | 99.1 | 97.2 |
Redundancy | 5.7 | 4.4 |
CC(1/2) | 1.000 | 0.670 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | 0.1 M sodium cacodylate pH 6.5, 5% PEG 8000, and 38% 2-methyl-2,4-pentanediol |