5VRC
Crystal structure for Methylobacterium extorquens PqqC (truncation of natural CD fusion)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-D |
Synchrotron site | APS |
Beamline | 23-ID-D |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-07-18 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.0332 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 62.501, 114.185, 145.403 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.510 - 2.000 |
R-factor | 0.19918 |
Rwork | 0.197 |
R-free | 0.23634 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1otv |
RMSD bond length | 0.028 |
RMSD bond angle | 2.457 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
Overall | |
Low resolution limit [Å] | 29.510 |
High resolution limit [Å] | 2.000 |
Rmerge | 0.077 |
Number of reflections | 69169 |
<I/σ(I)> | 14.4 |
Completeness [%] | 97.8 |
Redundancy | 6.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 292 | 500 microL well volumes. Drops suspended on siliconized glass. Protein solution: 8.0 mg/mL protein in buffer (50 mM Tris, pH 8.0, 200mM sodium chloride). Well solution: 100 mM HEPES, pH 8.07, 200 mM sodium chloride, and 23.75% w/v PEG-3350. All water used in well solution buffers was 0.55 mM sodium azide for fungal growth suppression. Protein:well solution was 1:1 (1 microL to 1 microL) |