5VPB
Transcription factor FosB/JunD bZIP domain in its oxidized form, type-I crystal
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 21-ID-F |
| Synchrotron site | APS |
| Beamline | 21-ID-F |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2016-10-22 |
| Detector | MARMOSAIC 225 mm CCD |
| Wavelength(s) | 0.9787 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 92.825, 99.261, 49.860 |
| Unit cell angles | 90.00, 109.40, 90.00 |
Refinement procedure
| Resolution | 43.738 - 2.691 |
| R-factor | 0.2415 |
| Rwork | 0.238 |
| R-free | 0.27460 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 5vpa |
| RMSD bond length | 0.002 |
| RMSD bond angle | 0.419 |
| Data reduction software | DENZO |
| Data scaling software | SCALEPACK |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.11.1_2575) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 43.740 | 43.740 | 2.750 |
| High resolution limit [Å] | 2.691 | 7.320 | 2.691 |
| Rmerge | 0.064 | 0.037 | 0.641 |
| Rmeas | 0.074 | 0.044 | 0.748 |
| Rpim | 0.038 | 0.023 | 0.384 |
| Number of reflections | 11872 | ||
| <I/σ(I)> | 20 | 2 | |
| Completeness [%] | 99.9 | 97.7 | 100 |
| Redundancy | 3.8 | 3.6 | 3.8 |
| CC(1/2) | 0.997 | 0.902 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 293 | 45% (v/v) 2-methyl-2,4-pentanediol (MPD), 0.3 M NaCl and 0.1 M HEPES pH 7.5 |






