5VEX
Structure of the human GLP-1 receptor complex with NNC0640
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL41XU |
Synchrotron site | SPring-8 |
Beamline | BL41XU |
Temperature [K] | 77 |
Detector technology | CCD |
Collection date | 2016-11-30 |
Detector | RAYONIX MX225HE |
Wavelength(s) | 1.0000 |
Spacegroup name | P 1 |
Unit cell lengths | 64.810, 67.510, 83.660 |
Unit cell angles | 91.55, 89.88, 107.56 |
Refinement procedure
Resolution | 30.000 - 3.000 |
R-factor | 0.234 |
Rwork | 0.233 |
R-free | 0.25600 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | PDB 5ee7 and 212L |
RMSD bond length | 0.010 |
RMSD bond angle | 0.860 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | BUSTER (2.10.2) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 3.160 |
High resolution limit [Å] | 3.000 | 3.000 |
Rmerge | 0.130 | 0.600 |
Number of reflections | 24745 | |
<I/σ(I)> | 5 | |
Completeness [%] | 91.4 | 87.7 |
Redundancy | 2.9 | 2.3 |
CC(1/2) | 0.990 | 0.660 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | LIPIDIC CUBIC PHASE | 293 | 0.4-0.45 M ammonium acetate, 0.1 M sodium acetate, pH 5.0-5.8, 38-40% PEG400 |