5VCX
CRYSTAL STRUCTURE OF HUMAN MYT1 KINASE DOMAIN (UNTREATED) IN COMPLEX WITH SARACATINIB
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 22-BM |
| Synchrotron site | APS |
| Beamline | 22-BM |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2013-10-31 |
| Detector | MARMOSAIC 225 mm CCD |
| Wavelength(s) | 1.00 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 56.480, 69.430, 86.530 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 43.814 - 2.700 |
| Rwork | 0.201 |
| R-free | 0.24360 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 5vcv |
| RMSD bond length | 0.007 |
| RMSD bond angle | 1.162 |
| Data reduction software | XDS |
| Data scaling software | XSCALE |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 43.814 | 43.814 | 2.770 |
| High resolution limit [Å] | 2.700 | 12.080 | 2.700 |
| Rmerge | 0.047 | 0.016 | 0.328 |
| Rmeas | 0.052 | 0.018 | 0.361 |
| Number of reflections | 9718 | 125 | 712 |
| <I/σ(I)> | 27.81 | 73.5 | 4.84 |
| Completeness [%] | 99.2 | 91.9 | 99.9 |
| Redundancy | 5.655 | 4.728 | 5.767 |
| CC(1/2) | 0.999 | 1.000 | 0.938 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 291 | 6.9 MG/ML MYT1, 25 mM HEPES, 100 MM SODIUM CHLORIDE, 0.5 mM DTT, 0.1 M CALCIUM CHLORIDE, 0.05 M TRIS pH 8.5, 10 % PEG 4000, 1 mM SARACATINIB |






