5VCW
CRYSTAL STRUCTURE OF HUMAN MYT1 KINASE DOMAIN IN COMPLEX WITH Pelitinib
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 22-ID |
| Synchrotron site | APS |
| Beamline | 22-ID |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2014-08-25 |
| Detector | MARMOSAIC 300 mm CCD |
| Wavelength(s) | 1.00 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 50.510, 112.900, 72.710 |
| Unit cell angles | 90.00, 109.27, 90.00 |
Refinement procedure
| Resolution | 36.425 - 2.250 |
| Rwork | 0.196 |
| R-free | 0.24570 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 5vcv |
| RMSD bond length | 0.010 |
| RMSD bond angle | 1.235 |
| Data reduction software | XDS |
| Data scaling software | XSCALE |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 36.425 | 36.425 | 2.310 |
| High resolution limit [Å] | 2.250 | 10.060 | 2.250 |
| Rmerge | 0.076 | 0.075 | 0.302 |
| Rmeas | 0.091 | 0.090 | 0.357 |
| Number of reflections | 36183 | 396 | 2679 |
| <I/σ(I)> | 10.29 | 16.89 | 3.85 |
| Completeness [%] | 98.9 | 92.7 | 99.4 |
| Redundancy | 3.426 | 3.235 | 3.425 |
| CC(1/2) | 0.992 | 0.989 | 0.950 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 291 | 6.9 MG/ML MYT1, 25 mM HEPES, 100 MM SODIUM CHLORIDE, 0.5 mM DTT, 0.05 M MES pH 6.5, 0.8 M Magnesium sulfate, 2 mM Pelitinib |






