5VBO
CRYSTAL STRUCTURE OF THE FIRST BROMODOMAIN OF HUMAN BRD4 IN COMPLEX WITH LRRK2-IN-1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-02-17 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 1.00 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 38.810, 50.900, 57.830 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 30.862 - 1.300 |
Rwork | 0.149 |
R-free | 0.16350 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4o74 |
RMSD bond length | 0.009 |
RMSD bond angle | 1.349 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 30.862 | 30.862 | 1.330 |
High resolution limit [Å] | 1.300 | 5.810 | 1.300 |
Rmerge | 0.033 | 0.031 | 0.231 |
Rmeas | 0.036 | 0.034 | 0.263 |
Number of reflections | 28353 | 372 | 1874 |
<I/σ(I)> | 33.16 | 59.22 | 6.42 |
Completeness [%] | 98.2 | 98.7 | 88.7 |
Redundancy | 6.913 | 5.605 | 4.12 |
CC(1/2) | 0.999 | 0.998 | 0.950 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 291 | 12.5 MG/ML BRD4, 55MM HEPES PH 7.5, 15% Jeffamine ED-2001 pH 7.0, 10% DMSO, 1 MM LRRK2-IN-1 |