5V6S
Crystal structure of small molecule acrylamide 1 covalently bound to K-Ras G12C
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.2.2 |
Synchrotron site | ALS |
Beamline | 8.2.2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-09-27 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.999 |
Spacegroup name | P 65 2 2 |
Unit cell lengths | 41.070, 41.070, 349.446 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 58.241 - 1.700 |
R-factor | 0.1745 |
Rwork | 0.173 |
R-free | 0.20350 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4l8g |
RMSD bond length | 0.010 |
RMSD bond angle | 1.173 |
Data reduction software | iMOSFLM |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | PHENIX (1.10.1_2155) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 58.300 | 1.790 |
High resolution limit [Å] | 1.700 | 1.700 |
Rmerge | 0.130 | 0.750 |
Rpim | 0.041 | 0.231 |
Number of reflections | 20169 | 2782 |
<I/σ(I)> | 13.5 | 4.5 |
Completeness [%] | 96.5 | 95.5 |
Redundancy | 8.7 | 9 |
CC(1/2) | 0.997 | 0.785 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 293 | 25% PEG 8000, 0.1M Hepes pH 7.5, vapor diffusion, hanging drop, 293K |