5V4Y
X-ray crystal structure of wild type HIV-1 protease in complex with GRL-09510
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 95 |
Detector technology | CCD |
Collection date | 2014-12-12 |
Detector | RAYONIX MX300-HS |
Wavelength(s) | 1 |
Spacegroup name | P 61 2 2 |
Unit cell lengths | 62.473, 62.473, 82.929 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 29.232 - 1.900 |
R-factor | 0.2105 |
Rwork | 0.206 |
R-free | 0.25330 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4hla |
RMSD bond length | 0.009 |
RMSD bond angle | 1.114 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | PHENIX (1.11.1-2575) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.830 |
High resolution limit [Å] | 1.800 | 1.800 |
Rmerge | 0.080 | 0.450 |
Number of reflections | 9082 | |
<I/σ(I)> | 26.41 | 2.1 |
Completeness [%] | 96.8 | 98.5 |
Redundancy | 2.9 | 2.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.9 | 295 | 0.8M sodium/potassium phosphate buffer (pH6.9) |