Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5V27

2.35 angstrom crystal structure of P97V 3-hydroxyanthranilate-3,4-dioxygenase from Cupriavidus metallidurans

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-ID
Synchrotron siteAPS
Beamline22-ID
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2013-07-12
DetectorMAR scanner 300 mm plate
Wavelength(s)1
Spacegroup nameP 65 2 2
Unit cell lengths58.032, 58.032, 231.868
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution37.973 - 2.352
R-factor0.2125
Rwork0.209
R-free0.27440
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1yfu
RMSD bond length0.007
RMSD bond angle0.820
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwarePHENIX
Refinement softwarePHENIX
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.430
High resolution limit [Å]2.3505.0602.350
Rmerge0.1260.0620.546
Rmeas0.1290.0640.556
Rpim0.0260.0140.106
Number of reflections10362
<I/σ(I)>5.6
Completeness [%]98.798100
Redundancy27.621.324.8
CC(1/2)0.9980.990
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8289100 mM Tris-HCl, 200 mM MgCl2, 20% PEG 8000, and 1 mM DTT, pH 8.0

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon